Let me explain, how to fix all buges

1. If you have 2 or more crafts for one item, add tag to the item in the first recipe "example.recipe.first" or something like this, in the second - "example.recipe.second", etc. or it may not work correctly.

Check this files how I use it:

corem:recipes/enchanted_golden_apple
corem:recipes/enchanted_golden_apple_2